Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797989.1_cds_XP_016457809.1_5113
CDS Infomation

[gene=LOC107781586] [db_xref=GeneID:107781586] [protein=sodium transporter HKT1-like] [protein_id=XP_016457809.1] [location=join(22024..23237,24879..25106,25453..25651)] [gbkey=CDS]
Sequence

ATGAGTAGCTTATCTTATTTTGGAAAGAAGCTGCAACATCTTTGTAGCACAATATTTTTG
TATCTGGCTTGTTTGTGTAGATCAACATGCTTCCTCATTTCTTGCCTCCACAAATCCATT
CTTCTCAGAGTGAACAAAATTTTCGTACAAATGTTTTACTTCATTTTCATCTCTCTTTTT
GGTTTTTGTATTCTCAGAATCTTGAAGCCAAGGAGTGTTGATTTTACACCTAGGAATTTA
GACTTGTTCTTCACTTCTGTTTCTTCGGTAACTGTCTCAAGCATGTCCACTGTAGAAATG
GAAGTCTTTTCCAATTCCCAACTCATTCTTATTACATTTTTAATGTTCATAGGTGGTGAA
ATCTTCACATCTATGGTTGGGCTTCATTTAATTAGGTCCAAGTTCAAGCCATGGAGAAAA
GATAGCAAAATTGAGTCAGTAATTAGTAGTACTACCACTTCTCCAAGAAACTCAGATTTT
AATGATGATATTGAGTTGGACATTGTTGTAATACCTGACTCCCCAAAACCAAAGTCAGAA
AATGATGAATTTCAAGATGATTTTGGATCATCAGATAAACAAACTCTCAAGTACCAATCT
ATCAAATTCCTAGGGTTTGTAACATTAGTTTATCTTCTAGTCATCAACATTATTGGTGTC
TCATCAGTTCTAGTGTATCTAGCCTGTGTTTCAAGTGCAAAAGATGTCCTAAGAAACAAG
GGGCTAAAAACCTTCACTTTTGCTATTTTTACAGTTGTTTCAACCTTTGCTAGCTGTGGT
TTTGTTCCAACGAACGAAAACATGATGGTATTTAGCAAGAACTCAGGTCTTCTTTTGATT
CTAATCCCTCAAGTCCTTTTTGGAAACACATTATATCCAGCATGTTTGAGACTTTGTATT
AAGTTCTTGGGAAAATTCTCTAAGAAAAGAGAAGCTAAATATTTGTTGAAGCATTCAAGA
GAAATAAGACATCTCCACTTGCTTCCTAGCCAACATTCAAGATTATTAGTGGTCACAGTG
TTTGGATTCATCTTGATCCAATTGATTATGTTTTGCTCTTTGGAGTGGAAATCTTCTTCT
CTCAATGGACTAAATAGCTACCAGAAAATAGTGGGATCATTATTTCAAGTTGTGAATGCA
AGGCACACTGGTGAAACCATTGTTGATATCTCCACTGTTTCCCCAGCCATTTTGGTGGTG
TTCATAGTAATGATGTATCTTCCTCCATACACATCATTTATACCAGTTAAAGGTGTTGGA
GAGACCCCTGAAGAGACTGTAGGGGAAAAACAAGGAAGAGGAAAAGTTGCAAAAAATCTC
ATACTTTCCCAACTTTCTTATATATTCTTCTTCATTGTTCTAATTTGCATCACAGAAAGG
AAACGGATGAAGGATGATCCACTCAACTTTAATGTGTTGAATATCACTCTTGAAGTCGTA
AGTGCATATGGAAATGTTGGTTTCACAACAGGATATAGTTGTGATCGGATGATAAACAGA
TATACAACTTGTAAGAATAAAACGTATGGATTTGTAGGGAAATGGAGTGATGAAGGTAAA
TTAATTCTCATTATTGTAATGTTTTTCGGAAGATTGAAGAAGTTCAATATGCAAGGGGGA
AAAGCATGGAAGCTCTTGTAA

Peptide Sequence

PEP ID

XP_016457809.1
PEP Infomation

PREDICTED: sodium transporter HKT1-like [Nicotiana tabacum]
Sequence

MSSLSYFGKKLQHLCSTIFLYLACLCRSTCFLISCLHKSILLRVNKIFVQMFYFIFISLF
GFCILRILKPRSVDFTPRNLDLFFTSVSSVTVSSMSTVEMEVFSNSQLILITFLMFIGGE
IFTSMVGLHLIRSKFKPWRKDSKIESVISSTTTSPRNSDFNDDIELDIVVIPDSPKPKSE
NDEFQDDFGSSDKQTLKYQSIKFLGFVTLVYLLVINIIGVSSVLVYLACVSSAKDVLRNK
GLKTFTFAIFTVVSTFASCGFVPTNENMMVFSKNSGLLLILIPQVLFGNTLYPACLRLCI
KFLGKFSKKREAKYLLKHSREIRHLHLLPSQHSRLLVVTVFGFILIQLIMFCSLEWKSSS
LNGLNSYQKIVGSLFQVVNARHTGETIVDISTVSPAILVVFIVMMYLPPYTSFIPVKGVG
ETPEETVGEKQGRGKVAKNLILSQLSYIFFFIVLICITERKRMKDDPLNFNVLNITLEVV
SAYGNVGFTTGYSCDRMINRYTTCKNKTYGFVGKWSDEGKLILIIVMFFGRLKKFNMQGG
KAWKLL

Transcript Sequence

Gene sequence data has not been registered.